I could imagine that for some species, especially the ones originating from calm, quiet waterbodies like the Tomistoma, waterfalls could be stressful. The same is none among hobby aquarists; some fish are touchy when it comes to loud noises and an all too strong current. Do you realize how noisy some of those zoo waterfalls are? And that constantly?
Of course there are waterfalls in the natural habitat, and of course some species are more tolerant to them or even enjoy them. Yet in nature, neither do most larger animals linger directly under waterfalls nor do they constantly stay there. And quite often, natural waterfalls don't have the odd unnatural dimensions the fake ones have...