Spring 2025 Japan trip planning

biggest_dreamer

Well-Known Member
This trip is still a ways off, and is still in its early planning phase... but I've been saying I want to visit Japan for well over a decade now, so the more effort I put towards planning for this, the "realer" it starts to become. I know there are quite a few similar threads on this forum, and I've read through them all and found them all to be very helpful in hashing out a zoo itinerary. Still, I wanted to work on my own list to both keep a record of where I intend to go, as well as hopefully ask a few questions along the way.

This isn't going to be a strictly zoo-focused trip by any stretch. I'm certainly jealous of those of you who head to Japan to hit 20 facilities over the span of two weeks, but that's not on the cards for me. This is a trip for both myself and my wife, and while she certainly enjoys visiting zoos with me, she doesn't quite hit the same obsessive notes that I do, so I'm hoping to strike a balance for our individual and shared interests. Zoos are also far from the only appealing thing the country has to offer, so the initial plan was "one or two" zoos before I began researching. I think it's likely that we'll wind up hitting quite a few more than that when it's all said and done.

I believe I'll be staying in Tokyo (likely the Asakusa area, specifically) for the trip's duration, so everything needs to be a comfortable day trip from there. My main goal is to see as many new species as possible, from the perspective of someone based in the southeastern US, while minimizing my time spent at subpar zoos (which I understand there are quite a few of). My main priority are mammals, then birds a fair bit lower down, then everything else.

As it stands, here's my facility priority list:

1. Zoorasia. Everything about this zoo seems like it's exactly what I'm looking for. It seems to have largely modern welfare standards, and has a trio of incredibly exciting monkeys (proboscis monkey, red-shanked douc, and Tibetan macaque). There are several other (sub)species I'd consider high priority new additions to my life list as well: Asiatic lion, dhole, brown fur seal, Eurasian otter, Goodfellow's tree kangaroo, golden takin, crested argus. It will also be nice to see several members of the "standard" native collection (tanuki, Japanese badger, Tsushima leopard cat, Japanese hare, Japanese red fox, Japanese black bear, red crowned crane) in comfortable exhibits, even though I'm sure I'll wind up running into several of them time and time again over this trip.

2. Tama Zoo. Tama is a very close second to Zoorasia - when I initially settled on just two zoos for this trip, these two seemed like no-brainers. They seem to typically be spoken of in the same breath with regard to animal welfare, which is massively reassuring. The Australian section is the biggest draw here, with Tasmanian devil and parma wallaby being the two centerpieces. There's plenty more new species for me here too, though: Himalayan tahr, mouflon, Japanese serow, wallaroo (common?), masked palm civet, two different hare species, with any luck the Japanese giant flying squirrel, and of course the infamous mole house and insectarium. In addition to the wallaroo, though, I'd love to know what wolf subspecies they keep, as well as the giraffe situation across all the zoos.

3. Saitama Children's Zoo. Quokkas. That's it, really. Quokkas. I told my wife I'd realized there's a zoo that keeps quokkas, and she said add it to the list, simple as that. Saitama seems like it doesn't necessarily hit the same quality standards of Tama or Zoorasia, but from what I've seen it generally doesn't look bad either. In addition to the quokkas, they also have a few more notable species for me: Pallas's cats (certainly one of the most prevalent species in US zoos I haven't seen), Chacoan mara, bush hyrax, pudu, northern Luzon giant cloud rat, gundi, plains viscacha, sika deer. Lots of very exciting small creatures here. I suspect there might be a few more I haven't seen documented as well.

4. Inokashira Park Zoo. Here is where we transition into the "maybe, if there's time" zoos. Inokashira Park hits a couple of sweet spots, though: it's small, it does have a few unique species, (Rhesus macaque, Japanese weasel, Japanese marten, Yakushima sika deer, Ryukyu flying fox, wild boar, another shot at the giant flying squirrel), and it's right next to the Ghibli Museum, which we're hoping will be the centerpiece of one of the days of our trip. I'd say this one's likely to happen, assuming we don't have awful luck in getting Ghibli tickets (or can only get them on Monday, the day this zoo is closed). I know that's its own whole can of worms, though.

5. Sumida Aquarium. We do intend to have a day dedicated to wandering around the Skytree area, and it would be nice to hit at least one aquarium, so this one's another solid "time willing". I don't keep a life list of fish, so to my knowledge the only new species here would be South American fur seal, but this still looks like a fairly neat facility. Which day we wind up in the Skytree area will be contingent on getting reservations for the Kirby Cafe, but thankfully that one seems slightly less stressful than Ghibli, and we'll still be going to the Skytree even if we miss out on Kirby.

6. Nogeyama Zoo. Can't say this one is a priority at all, but we do intend to take a second Yokohama day aside from Zoorasia, and it's free and relatively small and has kagus. That seems to be the only point of interest here, though, unless I wind up missing out on the marten at Inokashira Park.

I think these are the six places I'm most likely to visit. I know Ueno Zoo is a particularly glaring omission, but 1. The exhibit quality seems to be so dismal I don't think I'd be able to actually enjoy being here, and 2. There's actually relatively few interesting species here from what I can tell. The Chinese pangolin, secretarybird, great slaty woodpecker, and spectral tarsier would be the biggest draws, but they really aren't enough to overlook the overall state of the zoo. Maybe if I'd never seen any pangolin before that would be a different story, but I'm lucky enough to have seen Brookfield's about a year ago. Different species, of course, but you know. Aquamarine Fukushima was a serious contender for a day trip despite the distance, until I just found out their ribbon seal passed away a few weeks ago. Other aquariums in general do feel like potential missed opportunities, perhaps most notably Tokyo Sea Life or Sunshine Aquarium, but as it stands I'm not seeing a way to fit them into a partial day given where they're located or their size. Still, I know there's lots of seals and cetaceans to be seen in Japan, which has me interested if there's any other quick aquariums in the Tokyo area I should consider (for the record, my meager pinniped list is gray seal, harbor seal, California sea lion, walrus; cetaceans are bottlenose dolphin, Pacific white-sided dolphin, beluga, orca - so anything beyond those would be novel to me).

So now that I've got all that out of my system, a couple of questions, some of which I already touched on:

1. How difficult is it to get to these facilities via public transport? The JR Pass looks very appealing, but would it cover the buses from the stations to ie Zoorasia and Saitama? My exposure to public transportation is very limited given its total nonexistence where I'm from, so the navigation aspect poses a unique challenge here.

2. I'd like clarification on the species/subspecies of a few animals. The non-Masai giraffe population here in the US is a mess. What's it like in Japan? I don't think I've seen a subspecies listed for any of the zoos I'm interested in. There's a similar situation with the US's "wild boars", which I understand are all domestic pig hybrids. Is that likely to be the case for Inokashira Park's boars too? I'm also interested in the species of wallaroo and subspecies of wolf Tama keeps.

3. Any further suggestions for zoos or aquariums that are in the Tokyo area, particularly ones with rare mammals, would be appreciated. I think I've more or less done my research and have honed in on the ones that will suit me best, but I also wouldn't put it past me to have missed somewhere right next to my hotel that keeps indri. On a more serious note, I've found it a bit more difficult to keep track of the various aquariums, so as previously mentioned I'll gladly look into anything in or around Tokyo with interesting seals or pinnipeds in particular.

And ultimately, of course, I do know that given how far out this all is, anything and everything is subject to change. Zoorasia could suddenly lose all their langurs, Ueno might do a welfare 180, or hey maybe Edogawa Natural Zoo starts keeping numbats and saola and marine iguanas. ...Okay, maybe not anything, but I do know that I'm approaching these specific plans at least somewhat tentatively until we get to the point where we need to start locking things in.

Any advice or commentary would be greatly appreciated.
 
This trip is still a ways off, and is still in its early planning phase... but I've been saying I want to visit Japan for well over a decade now, so the more effort I put towards planning for this, the "realer" it starts to become. I know there are quite a few similar threads on this forum, and I've read through them all and found them all to be very helpful in hashing out a zoo itinerary. Still, I wanted to work on my own list to both keep a record of where I intend to go, as well as hopefully ask a few questions along the way.

This isn't going to be a strictly zoo-focused trip by any stretch. I'm certainly jealous of those of you who head to Japan to hit 20 facilities over the span of two weeks, but that's not on the cards for me. This is a trip for both myself and my wife, and while she certainly enjoys visiting zoos with me, she doesn't quite hit the same obsessive notes that I do, so I'm hoping to strike a balance for our individual and shared interests. Zoos are also far from the only appealing thing the country has to offer, so the initial plan was "one or two" zoos before I began researching. I think it's likely that we'll wind up hitting quite a few more than that when it's all said and done.

I believe I'll be staying in Tokyo (likely the Asakusa area, specifically) for the trip's duration, so everything needs to be a comfortable day trip from there. My main goal is to see as many new species as possible, from the perspective of someone based in the southeastern US, while minimizing my time spent at subpar zoos (which I understand there are quite a few of). My main priority are mammals, then birds a fair bit lower down, then everything else.

As it stands, here's my facility priority list:

1. Zoorasia. Everything about this zoo seems like it's exactly what I'm looking for. It seems to have largely modern welfare standards, and has a trio of incredibly exciting monkeys (proboscis monkey, red-shanked douc, and Tibetan macaque). There are several other (sub)species I'd consider high priority new additions to my life list as well: Asiatic lion, dhole, brown fur seal, Eurasian otter, Goodfellow's tree kangaroo, golden takin, crested argus. It will also be nice to see several members of the "standard" native collection (tanuki, Japanese badger, Tsushima leopard cat, Japanese hare, Japanese red fox, Japanese black bear, red crowned crane) in comfortable exhibits, even though I'm sure I'll wind up running into several of them time and time again over this trip.

2. Tama Zoo. Tama is a very close second to Zoorasia - when I initially settled on just two zoos for this trip, these two seemed like no-brainers. They seem to typically be spoken of in the same breath with regard to animal welfare, which is massively reassuring. The Australian section is the biggest draw here, with Tasmanian devil and parma wallaby being the two centerpieces. There's plenty more new species for me here too, though: Himalayan tahr, mouflon, Japanese serow, wallaroo (common?), masked palm civet, two different hare species, with any luck the Japanese giant flying squirrel, and of course the infamous mole house and insectarium. In addition to the wallaroo, though, I'd love to know what wolf subspecies they keep, as well as the giraffe situation across all the zoos.

3. Saitama Children's Zoo. Quokkas. That's it, really. Quokkas. I told my wife I'd realized there's a zoo that keeps quokkas, and she said add it to the list, simple as that. Saitama seems like it doesn't necessarily hit the same quality standards of Tama or Zoorasia, but from what I've seen it generally doesn't look bad either. In addition to the quokkas, they also have a few more notable species for me: Pallas's cats (certainly one of the most prevalent species in US zoos I haven't seen), Chacoan mara, bush hyrax, pudu, northern Luzon giant cloud rat, gundi, plains viscacha, sika deer. Lots of very exciting small creatures here. I suspect there might be a few more I haven't seen documented as well.

4. Inokashira Park Zoo. Here is where we transition into the "maybe, if there's time" zoos. Inokashira Park hits a couple of sweet spots, though: it's small, it does have a few unique species, (Rhesus macaque, Japanese weasel, Japanese marten, Yakushima sika deer, Ryukyu flying fox, wild boar, another shot at the giant flying squirrel), and it's right next to the Ghibli Museum, which we're hoping will be the centerpiece of one of the days of our trip. I'd say this one's likely to happen, assuming we don't have awful luck in getting Ghibli tickets (or can only get them on Monday, the day this zoo is closed). I know that's its own whole can of worms, though.

5. Sumida Aquarium. We do intend to have a day dedicated to wandering around the Skytree area, and it would be nice to hit at least one aquarium, so this one's another solid "time willing". I don't keep a life list of fish, so to my knowledge the only new species here would be South American fur seal, but this still looks like a fairly neat facility. Which day we wind up in the Skytree area will be contingent on getting reservations for the Kirby Cafe, but thankfully that one seems slightly less stressful than Ghibli, and we'll still be going to the Skytree even if we miss out on Kirby.

6. Nogeyama Zoo. Can't say this one is a priority at all, but we do intend to take a second Yokohama day aside from Zoorasia, and it's free and relatively small and has kagus. That seems to be the only point of interest here, though, unless I wind up missing out on the marten at Inokashira Park.

I think these are the six places I'm most likely to visit. I know Ueno Zoo is a particularly glaring omission, but 1. The exhibit quality seems to be so dismal I don't think I'd be able to actually enjoy being here, and 2. There's actually relatively few interesting species here from what I can tell. The Chinese pangolin, secretarybird, great slaty woodpecker, and spectral tarsier would be the biggest draws, but they really aren't enough to overlook the overall state of the zoo. Maybe if I'd never seen any pangolin before that would be a different story, but I'm lucky enough to have seen Brookfield's about a year ago. Different species, of course, but you know. Aquamarine Fukushima was a serious contender for a day trip despite the distance, until I just found out their ribbon seal passed away a few weeks ago. Other aquariums in general do feel like potential missed opportunities, perhaps most notably Tokyo Sea Life or Sunshine Aquarium, but as it stands I'm not seeing a way to fit them into a partial day given where they're located or their size. Still, I know there's lots of seals and cetaceans to be seen in Japan, which has me interested if there's any other quick aquariums in the Tokyo area I should consider (for the record, my meager pinniped list is gray seal, harbor seal, California sea lion, walrus; cetaceans are bottlenose dolphin, Pacific white-sided dolphin, beluga, orca - so anything beyond those would be novel to me).

So now that I've got all that out of my system, a couple of questions, some of which I already touched on:

1. How difficult is it to get to these facilities via public transport? The JR Pass looks very appealing, but would it cover the buses from the stations to ie Zoorasia and Saitama? My exposure to public transportation is very limited given its total nonexistence where I'm from, so the navigation aspect poses a unique challenge here.

2. I'd like clarification on the species/subspecies of a few animals. The non-Masai giraffe population here in the US is a mess. What's it like in Japan? I don't think I've seen a subspecies listed for any of the zoos I'm interested in. There's a similar situation with the US's "wild boars", which I understand are all domestic pig hybrids. Is that likely to be the case for Inokashira Park's boars too? I'm also interested in the species of wallaroo and subspecies of wolf Tama keeps.

3. Any further suggestions for zoos or aquariums that are in the Tokyo area, particularly ones with rare mammals, would be appreciated. I think I've more or less done my research and have honed in on the ones that will suit me best, but I also wouldn't put it past me to have missed somewhere right next to my hotel that keeps indri. On a more serious note, I've found it a bit more difficult to keep track of the various aquariums, so as previously mentioned I'll gladly look into anything in or around Tokyo with interesting seals or pinnipeds in particular.

And ultimately, of course, I do know that given how far out this all is, anything and everything is subject to change. Zoorasia could suddenly lose all their langurs, Ueno might do a welfare 180, or hey maybe Edogawa Natural Zoo starts keeping numbats and saola and marine iguanas. ...Okay, maybe not anything, but I do know that I'm approaching these specific plans at least somewhat tentatively until we get to the point where we need to start locking things in.

Any advice or commentary would be greatly appreciated.
Watch out for Black-faced Spoonbill and Japanese Woodpigeon
 
Oh right, I did notice that the spoonbill is at a handful of locations. Where is the wood pigeon kept, though? I'm not sure that I've seen it listed anywhere, but from what I've seen birds feel far less well documented than mammals.

On the note of public transport, I noticed that the JR pass is substantially increasing in price later this year. It seemed like a poor investment in the first place that we were willing to go for simply for the assurance of paying several hundred for transit in advance versus 10 dollars here, 10 dollars there over the span of the trip, but after the increase I definitely can't justify it anymore. So I guess in a way that makes me less concerned with transportation between the stations and zoos, since I won't feel obligated to figure out what the pass would work on.

Sunshine Aquarium may actually be up for consideration again now that we're discussing a partial day in Ikebukuro. Baikal seals are the biggest draw there that I've picked up at a glance.
 
a trio of incredibly exciting monkeys (proboscis monkey, red-shanked douc, and Tibetan macaque)
Quad actually. Zoorasia also has woolly monkeys (they had a young this year) which is not to be snubbed at since they are gone in the US and are in limbo in Europe.

In addition to the wallaroo, though, I'd love to know what wolf subspecies they keep, as well as the giraffe situation across all the zoos.
Jaza lists the wallaroo as common and does not list any subspecies for the wolves. Most giraffes in Japan are said to be reticulated with a small number of them being Masai but I don't know how pure the retics are @Veno might have an idea though. Another animal that is worth seeing in Tama is the brushtail possum. They are beautiful animals.
 
I’ve seen the JAZA site thrown around, but I really wasn’t sure how accurate/up to date they are and it didn’t seem like posters in previous threads were totally sure either. They still list Zoorasia as having kiang, for example, which I’m pretty sure is incorrect. Still, good info, I appreciate it!

Hadn’t seen mention of Tama’s brushtail possum at all, so that’s exciting news. And while I did know about the woolly monkeys, they keep getting overshadowed in my mind by the Asian species even though they really are just as compelling.
 
I'm also interested in the species of wallaroo

Common.

3. Any further suggestions for zoos or aquariums that are in the Tokyo area, particularly ones with rare mammals, would be appreciated. I think I've more or less done my research and have honed in on the ones that will suit me best, but I also wouldn't put it past me to have missed somewhere right next to my hotel that keeps indri. On a more serious note, I've found it a bit more difficult to keep track of the various aquariums, so as previously mentioned I'll gladly look into anything in or around Tokyo with interesting seals or pinnipeds in particular.

I know you said no to Ueno on exhibitry grounds, and to be honest as I haven't visited quite yet I can't speak for its enclosures, but I know for myself I decided to go because from a European perspective at least I knew I'd regret it if I didn't go and see some of the species. Spectral tarsier, Demidoff's bushbaby, Common treeshrew, Highland streaked tenrec, Woylie (for the US), Chinese pangolin (for the US), Gray bamboo lemur, Three striped night monkey, Japanese dormouse, a bunch of rare rodents, Lidth's jay, the aforementioned woodpecker...
It really is a lot of species that you can't see anywhere else. I agree that many of the enclosures don't look great from photos, but I'd like to judge it for myself. Not saying you should go, but just explaining my own reasoning for doing so.

Oh right, I did notice that the spoonbill is at a handful of locations. Where is the wood pigeon kept, though? I'm not sure that I've seen it listed anywhere, but from what I've seen birds feel far less well documented than mammals.

Spoonbill is present at Inokashira, Saitama and Tama of those in your plan. Woodpigeon is kept at Saitama, Inokashira and Tama also. For more info on the collections at each of these places go to this link: 園館の飼育動物 | 動物園と水族館. The lists aren't the most accurate and updated sometimes but it's definitely better than the zoos' websites.

So I guess in a way that makes me less concerned with transportation between the stations and zoos, since I won't feel obligated to figure out what the pass would work on.

I have to say that between getting a JR rail pass and pre-ordering a SUICA card before the trip, I genuinely have zero problems with transport. The only forms of major public transit I can't take are a couple of Shinkansen service lines.
 
If you are visiting next August, you should visit Night Zoo in Ueno. Between 7pm and 7:30pm, the exhibition is lit up, making it easy to photograph the tarsier. A friend of mine who was able to shoot a tarsier said that the only chance to get a good shot is for a few seconds after it gets bright.
 
Most giraffes in Japan are said to be reticulated with a small number of them being Masai but I don't know how pure the retics are @Veno might have an idea though.
Most giraffes in Japan are hybrids.
The only pure giraffes are 8 Masai giraffes left in Kyushu.
 
If you are visiting next August, you should visit Night Zoo in Ueno. Between 7pm and 7:30pm, the exhibition is lit up, making it easy to photograph the tarsier. A friend of mine who was able to shoot a tarsier said that the only chance to get a good shot is for a few seconds after it gets bright.
A night zoo sounds really compelling, but we're tentatively looking into March or April of 2025. Probably mid-April, sometime between Japanese spring break and Golden Week.
 
I made a trip similar to the one you want to do in Japan a few months ago and I have to tell you that you will love it: the country is fascinating and the collections of animals are incredible. It's true that my interest was different from yours, because I live in Europe and here the collections are very different from the American ones, but still, Japan is a paradise for any zoofreak.

The JRP is especially interesting if you travel between major cities (Tokyo, Osaka, Kyoto...). If you only travel through Tokyo and Yokohama, which are very close, you aren't interested. Here you'll use other means of transport, such as the subway.

Regarding the collections, I visited all those parks that you mention and I have to say that the most disappointing was Tama. It seemed to me very empty of animals and in general I find the collection less attractive than that of other centers, but this is my personal opinion. Anyway, all Japanese zoos and aquariums are interesting. I am very surprised by what you say about Ueno, in general it seemed to me a quite acceptable zoo, although it is true that some facilities, mainly for large mammals, are small. But overall it's a nice zoo, not a disaster. In general, the problem in Japanese zoos and aquariums is more focused with the size of the enclosures and the little environmental enrichment, especially in the case of large mammals, in my opinion, but for birds, reptiles, amphibians, fish, invertebrates and also for small mammals, in general, medium standards are more than acceptable.

Of all the places you mention, the only one that I would perhaps remove is the Sumida Aquarium: in my opinion it's not worth it, I don't remember almost anything attractive about it, and I don't recommend it unless you like "artistic" aquariums and kois. It would seem much more attractive to me to go to the aquariums of Fukushima, Oarai, Toba or Atagawa, in all of them you can see very rare species, such as different species of cetaceans, dugongs, Amazonian and African manatees, many species of pinnipeds, a multitude of sharks, animals of the depths... But of course, reaching them is more expensive, in time and money.

If you have doubts, we will try to help you, of course.
 
The JRP is especially interesting if you travel between major cities (Tokyo, Osaka, Kyoto...). If you only travel through Tokyo and Yokohama, which are very close, you aren't interested. Here you'll use other means of transport, such as the subway.
Yeah, I've since realized that it's definitely not going to be worth it given we won't be traveling more than an hour or so outside of Tokyo at any point, especially given the incoming price increase.

Of all the places you mention, the only one that I would perhaps remove is the Sumida Aquarium: in my opinion it's not worth it, I don't remember almost anything attractive about it, and I don't recommend it unless you like "artistic" aquariums and kois. It would seem much more attractive to me to go to the aquariums of Fukushima, Oarai, Toba or Atagawa, in all of them you can see very rare species, such as different species of cetaceans, dugongs, Amazonian and African manatees, many species of pinnipeds, a multitude of sharks, animals of the depths... But of course, reaching them is more expensive, in time and money.
Good to know. Sumida is far from a "must do", it just seemed to work out since we'll be in the Skytree area for at least a partial day. Toba seems really compelling, but it's definitely too far out for the trip we're currently planning. Atagawa's only real draw would be the Amazonian manatee, but it's definitely a draw. I'm not sure I could justify a trip to Atagawa just to see one species, though, unless I can find something else to do in the area as well. Oarai looks nice, but it's a little ways out from Tokyo and doesn't even have a particularly compelling life list species like Atagawa, so I think it's out outright. I dunno, I'm still thinking Sumida and/or Sunshine will probably end up being where we land on aquariums just for their sheer convenience.
 
Yeah, I've since realized that it's definitely not going to be worth it given we won't be traveling more than an hour or so outside of Tokyo at any point, especially given the incoming price increase.


Good to know. Sumida is far from a "must do", it just seemed to work out since we'll be in the Skytree area for at least a partial day. Toba seems really compelling, but it's definitely too far out for the trip we're currently planning. Atagawa's only real draw would be the Amazonian manatee, but it's definitely a draw. I'm not sure I could justify a trip to Atagawa just to see one species, though, unless I can find something else to do in the area as well. Oarai looks nice, but it's a little ways out from Tokyo and doesn't even have a particularly compelling life list species like Atagawa, so I think it's out outright. I dunno, I'm still thinking Sumida and/or Sunshine will probably end up being where we land on aquariums just for their sheer convenience.

We visited Atagawa, Izoo and Kawazoo on the same day, in the Izu Peninsula. In Atagawa you have a large collection of crocodiles and some turtles, as well as the Amazon manatee. At Izoo you have a huge collection of rare reptiles, including various tortoises and lizards from the Galapagos Islands. At Kawazoo you can see a large collection of amphibians, some of which are very rare. It's true that it was a stressful day, but it was worth it.

In Oarai you have a spectacular collection of sharks, as well as many other fish, invertebrates... It' a very good aquarium, although getting there is a small odyssey, like Fukushima.

In the end, it all depends on your priorities, that's clear.
 
We visited Atagawa, Izoo and Kawazoo on the same day, in the Izu Peninsula. In Atagawa you have a large collection of crocodiles and some turtles, as well as the Amazon manatee. At Izoo you have a huge collection of rare reptiles, including various tortoises and lizards from the Galapagos Islands. At Kawazoo you can see a large collection of amphibians, some of which are very rare. It's true that it was a stressful day, but it was worth it.

In Oarai you have a spectacular collection of sharks, as well as many other fish, invertebrates... It' a very good aquarium, although getting there is a small odyssey, like Fukushima.

Out of interest, for the Izu peninsula day was it all possible by public transport? Just for future reference in case I manage to make it to make it back to Japan at some point.
 
Out of interest, for the Izu peninsula day was it all possible by public transport? Just for future reference in case I manage to make it to make it back to Japan at some point.
Yes, in Japan we only use public transportation (trains, subways, buses). In Izu the biggest difficulty was getting to Izoo, because it is necessary to walk for a long time.
 
4. Inokashira Park Zoo. Here is where we transition into the "maybe if there's time" zoos. Inokashira Park hits a couple of sweet spots, though: it's small, but it does have a few unique species, (Rhesus macaque, Japanese weasel, Japanese marten, Yakushima sika deer, Ryukyu flying fox, wild boar, another shot at the giant flying squirrel), and it's right next to the Ghibli Museum, which we're hoping will be the centerpiece of one of the days of our trip. I'd say this one's likely to happen, assuming we don't have awful luck in getting Ghibli tickets (or can only get them on Monday, the day this zoo is closed). I know that's its own whole can of worms, though.

While Inokashira is what you may call a "Small zoo", I sort of recommend it more than Ueno. They keep endemic birds such as green pheasants, Copper Pheasants, and Red-Headed Woodpigeon, as well as those that you mentioned. You should really consider putting this zoo into your "must" category.

wolf subspecies they keep, as well as the giraffe situation across all the zoos.
Tama Zoo's English website says they are Korean Wolves, but it is translated, and an error is possible.

In Oarai you have a spectacular collection of sharks, as well as many other fish, invertebrates... It's a very good aquarium, although getting there is a small odyssey, like Fukushima.

I recommend renting a car to get there. You should go at the end of the day, and stay at a local hotel near the aquarium. I recommend that you get to the aquarium approximately 20 min before opening time. If you do that, you can park the car before it gets crowded and you can visit when there are fewer people/
 
Aquamarine Fukushima was a serious contender for a day trip despite the distance, until I just found out their ribbon seal passed away a few weeks ago. Other aquariums in general do feel like potential missed opportunities, perhaps most notably Tokyo Sea Life
Tokyo Sea Life and Aquamarine Fukushima have some of the largest collections of rarities in the world in aquariums, though most would be fish and invertebrates and not mammals or birds. Especially Tokyo Sea Life's extensive fish collection with rarities such as the Antarctic and deep sea species and Fukushima should still have the hydrothermal vent and cold seep tank.
 
They are far away, but I recommend Toba Aquarium and Aquaworld Oarai. Toba houses rare species such as Dugongs, African Manatees, Sea Otters, Finless porpoises, and Commerson's Dolphin. To get to Toba, you first ride the Tokaido-Sanyo Shinkansen from Tokyo Station to Nagoya. I advise you to stay a night at Nagoya, and maybe do some sightseeing. If you leave Tokyo in the Morning, you may be able to visit some of the facilities inside nagoya such as the Nagoya Port Aquarium and the Higashiyama Zoo. The next morning, you can take the Rapid Mie line to Toba station, and have a ten-minute walk to the Aquarium. You can spend a couple hours in the facility, and I advise that you arrive early around the time of opening, since it will be less crowded. The dugong alone will be worth it, not to mention commerson’s dolphin. Aquaworld Oarai has (I believe) the most sharks in Asia, with around 60 species, with rarities such as copper shark, smooth hammerhead, and many species of bullhead and wobbegong sharks. They even have a sardine show! They also have juvenile tiger sharks bts. I suggest to leave in the evening with a rent-a-car, and stay at a hotel near the aquarium. You should check out early in the morning and arrive around opening time. This is advised because when I was leaving the aquarium, There were cars that were waiting for an opening in the parking lot.

Aqua World Sharks | Aqua World Ibaraki Prefecture Oarai Aquarium [Official]
TOBA AQUARIUM
 
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