Pertinax, thanks for your answer on the origin of the captive Sumatran.
Given how few Indian rhinos there are and how disjunct their distribution from Javan rhinos is, I do not think this is possible. It seems likely that these species have been separated for millions of years and would not hybridize.
Before the massive declines caused by humans in the last few hundred years, Javan and Indian were very close geographically, probably even parapatric in the Assam region. Based on genetic evidence, Javan and Indian are fairly close (the entire genus diverged in the late Miocene/early Pliocene). Among the five traditionally recognized rhino species, none are closer than Javan and Indian. But that doesn't really say much about the possibility of hybrids and there's not much to base any guesses on. If I had to put my money on something, I would guess they can hybridize and the hybrid offspring is infertile. I could easily be wrong
Has anyone looked at the DNA of the Sumatran rhino? It wouldn't surprise me to know that harrisoni, certainly was pretty distinct.
Yes, the DNA of various populations has been reviewed to some extent, e.g. Morales et al. 1997 (Conservation Biology 11). There are differences between Bornean and other populations, and also some differences between populations within Sumatra.
Phyl: Borneo+(SW Sumatra+(E. Sumatra+W. Malaysia))
Whether the border is 'pretty distinct', to use your wording, can be discussed. Distinct enough to be separate subspecies and for some to suggest separate conservation management; yes. Distinct enough to be separate species; not really based on present evidence. However, if you follow the phylogenetic species concept, e.g. believe the northern and southern whites are separate species, you have a reasonable case for splitting the two Sumatran races into separate species. Then you also have a reasonable case for splitting the black into several species (based on limited evidence, some –but far from all– the traditional black taxa have diverged). Regardless of a possible wish of managing Bornean separately we may not have much of a choice. There are so few left that
any breeding is a step forward, even if it involves a mix of the two populations.
Incidentally - is there any way that DnA from museum animals might be used for cloning? I know it's a wild shot in the dark, but the Sumatran rhino is in dire straits and thinking outside the box might just turn out to be essential.
Yes, you can get DNA from museums specimens. No, it typically isn't complete, i.e. you would have to fill out the holes using other samples.
There are zoochat threads on cloning that discuss some of the points and I would recommend you check those (e.g. the mammoth thread). In general, I think cloning is a very problematic idea for conservation at this point. Among others: huge sums required could be spend more effeciently on safeguarding the ones that are alive, you need a lot of luck to succeed, even if you do succeed once it doesn't change anything (you need repeated successes with different individuals; otherwise you just have a bunch of identical individuals = guaranteed inbreeding) and you need a suitable carrier of the embryo. The last makes the Javan rhino particularly problematic compared to some other species where cloning has been suggested for conservation. The most logical choice as a carrier would be the Indian rhino. The problem is that the Indian is threatened too. Not as threatened as the Javan, but enough for it to be a serious concern. Removing a bunch of female Indians in the prime of their reproductive life would be very bad for conservation of the Indian, whether you took them from the captive population or the wild population. Pushing Indian towards extinction in an attempt to save Javan.....